Phytoplankton Ecophysiology Database


Cataloguing Physiological Traits of Phytoplankton




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     Select species of interest:
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Bolidomonas pacifica (CCMP 1866)
Chaetoceros calcitrans (CCMP 1315)
Coscinodiscus wailesii (CCMP 2513)
Coscinodiscus sp. (CCMP 1583)
Coscinodiscus radiatus (CCMP 312)
Coscinodiscus sp. (CCMP 2063)
Ditylum brightwelli ( J. Koester UW Armbrust Lab psmall)
Ditylum brightwelli ( J. Koester UW Armbrust Lab 36big)
Ditylum brightwelli ( J. Koester UW Armbrust Lab 36small)
Ditylum brightwelli ( J. Koester UW Armbrust Lab pbig)
Emiliania huxleyi (AWI )
Ostreococcus lucimarinus (CCMP 2514)
Ostreococcus tauri (OTH 95)
Ostreococcus sp. (RCC 809)
Pelagococcus sp. (CCMP 2414)
Phaeodactylum ( )
Porphyridium cruentum (CCMP 1328)
Prochlorococcus marinus var. pastoris (CCMP 1986)
Prochlorococcus sp. (PCC 9511)
Prochlorococcus sp. (SS 120)
Pyramimonas obovata (CCMP 722)
Synechococcus sp. (SR 9917)
Synechococcus sp. (RCC 307)
Synechococcus sp. (CCMP 2370)
Synechococcus sp. (WH 8102)
Thalassiosira punctigera (CCAP 1085/19)
Thalassiosira weissflogii (CCMP 1010)
Thalassiosira weissflogii (CCMP 1336)
Thalassiosira pseudonana (CCMP 1335)
Thalassiosira guillardii (CCMP 988)
Thalassiosira pseudonana (CCMP 1014)
Thalassiosira oceanica (CCMP 1003)

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Growth light intensity (umol photons m-2 s-1)


Growth light cycle (light/dark)


Growth light color


Temperature (degC)


Growth medium


Nitrogen depetion (yes/no)


Pdepletion (yes/no)


pCO2 (ppmv CO2)


High light shift intensity (umol photons m-2 s-1)


Light shift duration (mins)


Color of light used during high light shift


Note



     Select parameters of interest:
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Culture cell count (cells mL-1)
Cell volume (um3)
Growth rate (d-1)
Effective absorption cross section of PSII measured in the dark (A2)
Effective absorption cross section of PSII measured at growth light (A2)
Effective absorption cross section of PSII measured at light shift intensity (A2)
Effective absorption cross section of PSII photoinactivation measured at light shift intensity (A2, from NPQ corrected Fv/Fm)
Effective absorption cross section of PSII photoinactivation measured at light shift intensity (A2, 1/Fo-1/Fm)
Photochemical quenching
phiPSII (Treatment light)
phiPSII (Growth light)
NPQ relaxed by dark incubation
NPQ relaxed by DCMU
Krecovery (s-1)
Kpi Exponential decay rate (s-1)
Total Protein (pg cell-1)
PsbA (fmol PsbA/ug total protein)
PsbD (fmol PsbD/ug total protein)
PsbB (fmol PsbB/ug total protein)
RbcL (fmol RbcL/ug total protein)
PsaC (fmol PsaC/ug total protein)
AtpB (fmol AtpB/ug total protein)
PetC (fmol PetC/ug total protein)
chlorophyll a (fmol cell-1)
chlorophyll a (nmol/L)
chlb:chla ratio
chlc1:chla ratio
chlc2:chla ratio
chlc3:chla ratio
fucoxanthin:chla ratio
diatoxanthin:chla ratio
diadinoxanthin:chla ratio
zea:chla ratio
anthera:chla ratio
viola:chla ratio
Deepoxidation ratio
Carbon (pg cell-1)
Nitrogen (pg cell-1)
Carbon to Nitrogen molar ratio
Replicates       AV/STD/N