Phytoplankton Ecophysiology Database
Cataloguing Physiological Traits of Phytoplankton
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Bolidomonas pacifica (CCMP 1866)
Chaetoceros calcitrans (CCMP 1315)
Coscinodiscus radiatus (CCMP 312)
Coscinodiscus sp. (CCMP 2063)
Coscinodiscus wailesii (CCMP 2513)
Coscinodiscus sp. (CCMP 1583)
Ditylum brightwelli ( J. Koester UW Armbrust Lab 36small)
Ditylum brightwelli ( J. Koester UW Armbrust Lab pbig)
Ditylum brightwelli ( J. Koester UW Armbrust Lab psmall)
Ditylum brightwelli ( J. Koester UW Armbrust Lab 36big)
Emiliania huxleyi (AWI )
Ostreococcus tauri (OTH 95)
Ostreococcus sp. (RCC 809)
Ostreococcus lucimarinus (CCMP 2514)
Pelagococcus sp. (CCMP 2414)
Phaeodactylum ( )
Porphyridium cruentum (CCMP 1328)
Prochlorococcus sp. (PCC 9511)
Prochlorococcus sp. (SS 120)
Pyramimonas obovata (CCMP 722)
Synechococcus sp. (WH 8102)
Synechococcus sp. (SR 9917)
Synechococcus sp. (RCC 307)
Thalassiosira guillardii (CCMP 988)
Thalassiosira pseudonana (CCMP 1014)
Thalassiosira oceanica (CCMP 1003)
Thalassiosira punctigera (CCAP 1085/19)
Thalassiosira weissflogii (CCMP 1010)
Thalassiosira weissflogii (CCMP 1336)
Thalassiosira pseudonana (CCMP 1335)
Narrow search by conditions
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Growth light intensity (µmol photons m-2 s-1)
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25
30
95
100
150
180
300
Growth light cycle (light/dark)
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12
12/12
24
24/0
Growth light color
ALL
blue
white
Temperature (°C)
ALL
12
18
20
21
22
24
Growth medium
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EASW
f/2 + Si
K
PCR S11
Nitrogen depetion (yes/no)
ALL
no
yes
Pdepletion (yes/no)
ALL
no
pCO2 (ppmv CO2)
ALL
190
380
390
750
High light shift intensity (µmol photons m-2 s-1)
ALL
150
280
300
450
1400
Light shift duration (mins)
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60
90
Color of light used during high light shift
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blue
green
red
white
Note
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pH used to drive CO2 concentration
Select parameters of interest:
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Culture cell count (cells mL-1)
Cell volume (µm3)
Growth rate (d-1)
Effective absorption cross section of PSII measured in the dark (A²)
Effective absorption cross section of PSII measured at growth light (A²)
Effective absorption cross section of PSII measured at light shift intensity (A²)
Effective absorption cross section of PSII photoinactivation measured at light shift intensity (A², from NPQ corrected Fv/Fm)
Effective absorption cross section of PSII photoinactivation measured at light shift intensity (A², 1/Fo-1/Fm)
Photochemical quenching
Treatment light
Growth light
NPQ releaxed by dark incubation
NPQ relaxed by DCMU
NPQ relaxed by CCCP
Total Protein (pg cell-1)
PsbA (fmol PsbA/µg total protein)
PsbD (fmol PsbD/µg total protein)
PsbB (fmol PsbB/µg total protein)
RbcL (fmol RbcL/µg total protein)
PsaC (fmol PsaC/µg total protein)
AtpB (fmol AtpB/µg total protein)
PetC (fmol PetC/µg total protein)
chlorophyll a (fmol cell-1)
chlorophyll a (nmol/L)
chlb:chla ratio
chlc1:chla ratio
chlc2:chla ratio
chlc3:chla ratio
fucoxanthin:chla ratio
diatoxanthin:chla ratio
diadinoxanthin:chla ratio
zea:chla ratio
anthera:chla ratio
viola:chla ratio
Deepoxidation ratio
Carbon (pg cell-1)
Nitrogen (pg cell-1)
Carbon to Nitrogen molar ratio
Note
Replicates
AV/STD/N